Multiple sequence alignments and phylogenetic trees for plant families

The number of species represented in each alignment is indicated. Click on the number to visualize the alignment and phylogenetic tree.

The table describes the number of sequences for each region-family:
- The alignment and neighbor joining phylogenetic tree of each region-family were calculated in GENEIOUS.
- The trees were generated using Tamura-Nei model. Both phylogenetic trees and alignments can be refined in WASABI with PAGAN and PRANK.

Family	atpF-atpH	psbA-trnH	trnL CD	trnL GH	rbcL	matK	ITS	Number of Regions
Acanthaceae Wikipedia ToL Taxonomy		15		231		12	20	4
Aceraceae Wikipedia ToL Taxonomy		42		118				2
Adoxaceae Wikipedia ToL Taxonomy		81		14				2
Alismataceae Wikipedia ToL Taxonomy		42				15		2
Annonaceae Wikipedia ToL Taxonomy		129	87	670	289	23		5
Apiaceae Wikipedia ToL Taxonomy	11	99		188		12	1073	5
Apocynaceae Wikipedia ToL Taxonomy		58	22	810		76		4
Araliaceae Wikipedia ToL Taxonomy		115		321		20		3
Arecaceae Wikipedia ToL Taxonomy		24		300	53	237		4
Aspleniaceae Wikipedia ToL Taxonomy		11						1
Asteraceae Wikipedia ToL Taxonomy	62	275	283	1955	126	603	1155	7
Betulaceae Wikipedia ToL Taxonomy		42		58		14		3
Boraginaceae Wikipedia ToL Taxonomy		102	27	405		24		4
Brassicaceae Wikipedia ToL Taxonomy	14	16	176	1236		98	58	6
Burseraceae Wikipedia ToL Taxonomy		62	20	69				3
Cactaceae Wikipedia ToL Taxonomy		15	84	449		278		4
Caprifoliaceae Wikipedia ToL Taxonomy		18		241	10	21		4
Celastraceae Wikipedia ToL Taxonomy		26		265	55			3
Colchicaceae Wikipedia ToL Taxonomy	12	54		217		12		4
Combretaceae Wikipedia ToL Taxonomy		43						1
Convolvulaceae Wikipedia ToL Taxonomy		12		225	18			3
Cornaceae Wikipedia ToL Taxonomy		39		16		10		3
Cucurbitaceae Wikipedia ToL Taxonomy		196		416	12			3
Cupressaceae Wikipedia ToL Taxonomy	17	17		133	17	23	118	6
Cyperaceae Wikipedia ToL Taxonomy	28	42		591				3
Dicranaceae Wikipedia ToL Taxonomy		11						1
Dioscoreaceae Wikipedia ToL Taxonomy		51		62		33		3
Ephedraceae Wikipedia ToL Taxonomy		21		18		12		3
Escalloniaceae Wikipedia ToL Taxonomy		37						1
Fabaceae Wikipedia ToL Taxonomy		358	232	2599		1476	49	5
Fagaceae Wikipedia ToL Taxonomy		10		89	22	56	163	5
Fissidentaceae Wikipedia ToL Taxonomy	11	12						2
Frullaniaceae Wikipedia ToL Taxonomy		114						1
Gentianaceae Wikipedia ToL Taxonomy		47		406				2
Gesneriaceae Wikipedia ToL Taxonomy		213	21	556		135		4
Grossulariaceae Wikipedia ToL Taxonomy		42						1
Hamamelidaceae Wikipedia ToL Taxonomy		19		47	11	33		4
Hyacinthaceae Wikipedia ToL Taxonomy		21		260		20		3
Hydrangeaceae Wikipedia ToL Taxonomy		34		14		23		3
Hymenophyllaceae Wikipedia ToL Taxonomy		14						1
Iridaceae Wikipedia ToL Taxonomy	22	61	15	518		210	350	6
Jamesoniellaceae Wikipedia ToL Taxonomy		30						1
Juglandaceae Wikipedia ToL Taxonomy		18		20				2
Lamiaceae Wikipedia ToL Taxonomy		84	22	707		178	20	5
Lauraceae Wikipedia ToL Taxonomy		36		56	21	52		4
Lejeuneaceae Wikipedia ToL Taxonomy		77						1
Linaceae Wikipedia ToL Taxonomy		16		59	22			3
Loasaceae Wikipedia ToL Taxonomy		10		119		65		3
Loranthaceae Wikipedia ToL Taxonomy		12		79				2
Magnoliaceae Wikipedia ToL Taxonomy		23	10	48		73		4
Melastomataceae Wikipedia ToL Taxonomy	23	20					922	3
Moraceae Wikipedia ToL Taxonomy	67	84		70			449	4
Myrtaceae Wikipedia ToL Taxonomy		44		123		127		3
Oleaceae Wikipedia ToL Taxonomy		11	13	135	21	16		5
Orchidaceae Wikipedia ToL Taxonomy	21	68	40	1538	16	1038	51	7
Orobanchaceae Wikipedia ToL Taxonomy		24	57	320	12	102	10	6
Orthotrichaceae Wikipedia ToL Taxonomy		32						1
Pallaviciniaceae Wikipedia ToL Taxonomy		10						1
Passifloraceae Wikipedia ToL Taxonomy		31		170				2
Penaeaceae Wikipedia ToL Taxonomy		29						1
Pinaceae Wikipedia ToL Taxonomy	58	50	55		23	123		5
Piperaceae Wikipedia ToL Taxonomy		21		61	12	121		4
Poaceae Wikipedia ToL Taxonomy	181	425	397	2078	107	476	830	7
Polygonaceae Wikipedia ToL Taxonomy		49	12	215	19	58	39	6
Potamogetonaceae Wikipedia ToL Taxonomy		34		49				2
Pottiaceae Wikipedia ToL Taxonomy		15					68	2
Primulaceae Wikipedia ToL Taxonomy	14	30		222		223	577	5
Pteridaceae Wikipedia ToL Taxonomy		17		11		18		3
Ranunculaceae Wikipedia ToL Taxonomy	19	114		343		279		4
Rosaceae Wikipedia ToL Taxonomy	22	228	21	766		273	581	6
Rubiaceae Wikipedia ToL Taxonomy	11	115	335	1427		42	49	6
Salicaceae Wikipedia ToL Taxonomy	11	11	17	124			176	5
Saxifragaceae Wikipedia ToL Taxonomy		20	12	105		20		4
Solanaceae Wikipedia ToL Taxonomy		160	26	721		100		4
Sphagnaceae Wikipedia ToL Taxonomy		23				10		2
Tamaricaceae Wikipedia ToL Taxonomy		15						1
Veroniceae Wikipedia ToL Taxonomy		62						1
Violaceae Wikipedia ToL Taxonomy	48	49		192		51	130	5
Vitaceae Wikipedia ToL Taxonomy		115	36	300				3