Multiple sequence alignments and phylogenetic trees for plant families

The number of species represented in each alignment is indicated. Click on the number to visualize the alignment and phylogenetic tree.

The table describes the number of sequences for each region-family:
- The alignment and neighbor joining phylogenetic tree of each region-family were calculated in GENEIOUS.
- The trees were generated using Tamura-Nei model. Both phylogenetic trees and alignments can be refined in WASABI with PAGAN and PRANK.

Family	atpF-atpH	psbA-trnH	trnL CD	trnL GH	rbcL	matK	ITS	Number of Regions
Acanthaceae Wikipedia ToL Taxonomy		15		231		12	20	4
Actinidiaceae Wikipedia ToL Taxonomy				37		29		2
Aizoaceae Wikipedia ToL Taxonomy				218		12		2
Alismataceae Wikipedia ToL Taxonomy		42				15		2
Amaranthaceae Wikipedia ToL Taxonomy				150		70		2
Amaryllidaceae Wikipedia ToL Taxonomy			18	440	19	150	920	5
Anacampserotaceae Wikipedia ToL Taxonomy						19		1
Ancistrocladaceae Wikipedia ToL Taxonomy						12		1
Annonaceae Wikipedia ToL Taxonomy		129	87	670	289	23		5
Apiaceae Wikipedia ToL Taxonomy	11	99		188		12	1073	5
Apocynaceae Wikipedia ToL Taxonomy		58	22	810		76		4
Araceae Wikipedia ToL Taxonomy	34		63	434	27	287		5
Araliaceae Wikipedia ToL Taxonomy		115		321		20		3
Araucariaceae Wikipedia ToL Taxonomy	15					10		2
Arecaceae Wikipedia ToL Taxonomy		24		300	53	237		4
Aristolochiaceae Wikipedia ToL Taxonomy				75		96		2
Asparagaceae Wikipedia ToL Taxonomy	24			159	27	159	95	5
Asteraceae Wikipedia ToL Taxonomy	62	275	283	1955	126	603	1155	7
Begoniaceae Wikipedia ToL Taxonomy				97	24	31		3
Berberidaceae Wikipedia ToL Taxonomy	54			64		52		3
Betulaceae Wikipedia ToL Taxonomy		42		58		14		3
Boraginaceae Wikipedia ToL Taxonomy		102	27	405		24		4
Brassicaceae Wikipedia ToL Taxonomy	14	16	176	1236		98	58	6
Bromeliaceae Wikipedia ToL Taxonomy				313		265		2
Bruniaceae Wikipedia ToL Taxonomy						63		1
Cactaceae Wikipedia ToL Taxonomy		15	84	449		278		4
Campanulaceae Wikipedia ToL Taxonomy	33			288		62	324	4
Capparaceae Wikipedia ToL Taxonomy				22		50		2
Caprifoliaceae Wikipedia ToL Taxonomy		18		241	10	21		4
Caryophyllaceae Wikipedia ToL Taxonomy			28	189		96		3
Characeae Wikipedia ToL Taxonomy						10		1
Cleomaceae Wikipedia ToL Taxonomy						29		1
Colchicaceae Wikipedia ToL Taxonomy	12	54		217		12		4
Cornaceae Wikipedia ToL Taxonomy		39		16		10		3
Cupressaceae Wikipedia ToL Taxonomy	17	17		133	17	23	118	6
Cycadaceae Wikipedia ToL Taxonomy						10		1
Didiereaceae Wikipedia ToL Taxonomy						11		1
Dioscoreaceae Wikipedia ToL Taxonomy		51		62		33		3
Ebenaceae Wikipedia ToL Taxonomy				130		86		2
Ephedraceae Wikipedia ToL Taxonomy		21		18		12		3
Ericaceae Wikipedia ToL Taxonomy			10	344	27	192	93	5
Euphorbiaceae Wikipedia ToL Taxonomy			39	796	12	179		4
Fabaceae Wikipedia ToL Taxonomy		358	232	2599		1476	49	5
Fagaceae Wikipedia ToL Taxonomy		10		89	22	56	163	5
Geraniaceae Wikipedia ToL Taxonomy				160		14		2
Gesneriaceae Wikipedia ToL Taxonomy		213	21	556		135		4
Gnetaceae Wikipedia ToL Taxonomy			13			12		2
Haloragaceae Wikipedia ToL Taxonomy						78		1
Hamamelidaceae Wikipedia ToL Taxonomy		19		47	11	33		4
Hippocastanaceae Wikipedia ToL Taxonomy						13		1
Hyacinthaceae Wikipedia ToL Taxonomy		21		260		20		3
Hydrangeaceae Wikipedia ToL Taxonomy		34		14		23		3
Hydrocharitaceae Wikipedia ToL Taxonomy						12		1
Hypoxidaceae Wikipedia ToL Taxonomy				47		11		2
Iridaceae Wikipedia ToL Taxonomy	22	61	15	518		210	350	6
Lamiaceae Wikipedia ToL Taxonomy		84	22	707		178	20	5
Lauraceae Wikipedia ToL Taxonomy		36		56	21	52		4
Lentibulariaceae Wikipedia ToL Taxonomy				18		75	30	3
Leucobryaceae Wikipedia ToL Taxonomy					24	16		2
Liliaceae Wikipedia ToL Taxonomy	37		15	160		129	416	5
Linderniaceae Wikipedia ToL Taxonomy						12		1
Loasaceae Wikipedia ToL Taxonomy		10		119		65		3
Lythraceae Wikipedia ToL Taxonomy				39		23		2
Magnoliaceae Wikipedia ToL Taxonomy		23	10	48		73		4
Malpighiaceae Wikipedia ToL Taxonomy				75	179	15		3
Malvaceae Wikipedia ToL Taxonomy			24	214		142	665	4
Marantaceae Wikipedia ToL Taxonomy				87		45		2
Melanthiaceae Wikipedia ToL Taxonomy	19		19	83		75		4
Menyanthaceae Wikipedia ToL Taxonomy						35		1
Montiaceae Wikipedia ToL Taxonomy						37		1
Myristicaceae Wikipedia ToL Taxonomy				14		13		2
Myrtaceae Wikipedia ToL Taxonomy		44		123		127		3
Nartheciaceae Wikipedia ToL Taxonomy				25		14		2
Nepenthaceae Wikipedia ToL Taxonomy				11		80		2
Nymphaeaceae Wikipedia ToL Taxonomy				53		33		2
Oleaceae Wikipedia ToL Taxonomy		11	13	135	21	16		5
Orchidaceae Wikipedia ToL Taxonomy	21	68	40	1538	16	1038	51	7
Orobanchaceae Wikipedia ToL Taxonomy		24	57	320	12	102	10	6
Oxalidaceae Wikipedia ToL Taxonomy				246		12		2
Paeoniaceae Wikipedia ToL Taxonomy						29		1
Papaveraceae Wikipedia ToL Taxonomy				115		48		2
Pentaphylacaceae Wikipedia ToL Taxonomy				39		11		2
Phyllanthaceae Wikipedia ToL Taxonomy						168	90	2
Pinaceae Wikipedia ToL Taxonomy	58	50	55		23	123		5
Piperaceae Wikipedia ToL Taxonomy		21		61	12	121		4
Plantaginaceae Wikipedia ToL Taxonomy	13			451		47		3
Poaceae Wikipedia ToL Taxonomy	181	425	397	2078	107	476	830	7
Podocarpaceae Wikipedia ToL Taxonomy				102		13		2
Podostemaceae Wikipedia ToL Taxonomy				35		163		2
Polygonaceae Wikipedia ToL Taxonomy		49	12	215	19	58	39	6
Primulaceae Wikipedia ToL Taxonomy	14	30		222		223	577	5
Proteaceae Wikipedia ToL Taxonomy				156		119		2
Pteridaceae Wikipedia ToL Taxonomy		17		11		18		3
Ranunculaceae Wikipedia ToL Taxonomy	19	114		343		279		4
Restionaceae Wikipedia ToL Taxonomy				217	96	241		3
Rosaceae Wikipedia ToL Taxonomy	22	228	21	766		273	581	6
Rubiaceae Wikipedia ToL Taxonomy	11	115	335	1427		42	49	6
Rutaceae Wikipedia ToL Taxonomy			17	186		152		3
Sapindaceae Wikipedia ToL Taxonomy				207		60		2
Sarraceniaceae Wikipedia ToL Taxonomy						14		1
Saxifragaceae Wikipedia ToL Taxonomy		20	12	105		20		4
Scrophulariaceae Wikipedia ToL Taxonomy			49	198		10		3
Simaroubaceae Wikipedia ToL Taxonomy				15	30	57		3
Solanaceae Wikipedia ToL Taxonomy		160	26	721		100		4
Sphagnaceae Wikipedia ToL Taxonomy		23				10		2
Symplocaceae Wikipedia ToL Taxonomy				84		77		2
Taxaceae Wikipedia ToL Taxonomy			24	12	42	27		4
Theaceae Wikipedia ToL Taxonomy			19	82		30	98	4
Tofieldiaceae Wikipedia ToL Taxonomy				22		24		2
Violaceae Wikipedia ToL Taxonomy	48	49		192		51	130	5
Xanthorrhoeaceae Wikipedia ToL Taxonomy				45	139	57		3
Zamiaceae Wikipedia ToL Taxonomy	64			55		26	89	4
Zingiberaceae Wikipedia ToL Taxonomy	16			120		171	65	4