Multiple sequence alignments and phylogenetic trees for plant families

The number of species represented in each alignment is indicated. Click on the number to visualize the alignment and phylogenetic tree.

The table describes the number of sequences for each region-family:
- The alignment and neighbor joining phylogenetic tree of each region-family were calculated in GENEIOUS.
- The trees were generated using Tamura-Nei model. Both phylogenetic trees and alignments can be refined in WASABI with PAGAN and PRANK.

Family	atpF-atpH	psbA-trnH	trnL CD	trnL GH	rbcL	matK	ITS	Number of Regions
Apiaceae Wikipedia ToL Taxonomy	11	99		188		12	1073	5
Araceae Wikipedia ToL Taxonomy	34		63	434	27	287		5
Araucariaceae Wikipedia ToL Taxonomy	15					10		2
Asparagaceae Wikipedia ToL Taxonomy	24			159	27	159	95	5
Asteraceae Wikipedia ToL Taxonomy	62	275	283	1955	126	603	1155	7
Berberidaceae Wikipedia ToL Taxonomy	54			64		52		3
Brassicaceae Wikipedia ToL Taxonomy	14	16	176	1236		98	58	6
Campanulaceae Wikipedia ToL Taxonomy	33			288		62	324	4
Colchicaceae Wikipedia ToL Taxonomy	12	54		217		12		4
Cupressaceae Wikipedia ToL Taxonomy	17	17		133	17	23	118	6
Cyperaceae Wikipedia ToL Taxonomy	28	42		591				3
Fissidentaceae Wikipedia ToL Taxonomy	11	12						2
Iridaceae Wikipedia ToL Taxonomy	22	61	15	518		210	350	6
Liliaceae Wikipedia ToL Taxonomy	37		15	160		129	416	5
Melanthiaceae Wikipedia ToL Taxonomy	19		19	83		75		4
Melastomataceae Wikipedia ToL Taxonomy	23	20					922	3
Moraceae Wikipedia ToL Taxonomy	67	84		70			449	4
Musaceae Wikipedia ToL Taxonomy	36			29			70	3
Orchidaceae Wikipedia ToL Taxonomy	21	68	40	1538	16	1038	51	7
Paniceae Wikipedia ToL Taxonomy	28							1
Pinaceae Wikipedia ToL Taxonomy	58	50	55		23	123		5
Plantaginaceae Wikipedia ToL Taxonomy	13			451		47		3
Poaceae Wikipedia ToL Taxonomy	181	425	397	2078	107	476	830	7
Primulaceae Wikipedia ToL Taxonomy	14	30		222		223	577	5
Ranunculaceae Wikipedia ToL Taxonomy	19	114		343		279		4
Rosaceae Wikipedia ToL Taxonomy	22	228	21	766		273	581	6
Rubiaceae Wikipedia ToL Taxonomy	11	115	335	1427		42	49	6
Salicaceae Wikipedia ToL Taxonomy	11	11	17	124			176	5
Violaceae Wikipedia ToL Taxonomy	48	49		192		51	130	5
Zamiaceae Wikipedia ToL Taxonomy	64			55		26	89	4
Zingiberaceae Wikipedia ToL Taxonomy	16			120		171	65	4