Multiple sequence alignments and phylogenetic trees for plant families

The number of species represented in each alignment is indicated. Click on the number to visualize the alignment and phylogenetic tree.

The table describes the number of sequences for each region-family:
- The alignment and neighbor joining phylogenetic tree of each region-family were calculated in GENEIOUS.
- The trees were generated using Tamura-Nei model. Both phylogenetic trees and alignments can be refined in WASABI with PAGAN and PRANK.

Family	atpF-atpH	psbA-trnH	trnL CD	trnL GH	rbcL	matK	ITS	Number of Regions
Acanthaceae Wikipedia ToL Taxonomy		15		231		12	20	4
Amaryllidaceae Wikipedia ToL Taxonomy			18	440	19	150	920	5
Apiaceae Wikipedia ToL Taxonomy	11	99		188		12	1073	5
Asparagaceae Wikipedia ToL Taxonomy	24			159	27	159	95	5
Asteraceae Wikipedia ToL Taxonomy	62	275	283	1955	126	603	1155	7
Brachytheciaceae Wikipedia ToL Taxonomy							18	1
Brassicaceae Wikipedia ToL Taxonomy	14	16	176	1236		98	58	6
Campanulaceae Wikipedia ToL Taxonomy	33			288		62	324	4
Cupressaceae Wikipedia ToL Taxonomy	17	17		133	17	23	118	6
Ericaceae Wikipedia ToL Taxonomy			10	344	27	192	93	5
Fabaceae Wikipedia ToL Taxonomy		358	232	2599		1476	49	5
Fagaceae Wikipedia ToL Taxonomy		10		89	22	56	163	5
Iridaceae Wikipedia ToL Taxonomy	22	61	15	518		210	350	6
Lamiaceae Wikipedia ToL Taxonomy		84	22	707		178	20	5
Lentibulariaceae Wikipedia ToL Taxonomy				18		75	30	3
Liliaceae Wikipedia ToL Taxonomy	37		15	160		129	416	5
Lophocoleaceae Wikipedia ToL Taxonomy							24	1
Malvaceae Wikipedia ToL Taxonomy			24	214		142	665	4
Melastomataceae Wikipedia ToL Taxonomy	23	20					922	3
Moraceae Wikipedia ToL Taxonomy	67	84		70			449	4
Musaceae Wikipedia ToL Taxonomy	36			29			70	3
Orchidaceae Wikipedia ToL Taxonomy	21	68	40	1538	16	1038	51	7
Orobanchaceae Wikipedia ToL Taxonomy		24	57	320	12	102	10	6
Phyllanthaceae Wikipedia ToL Taxonomy						168	90	2
Poaceae Wikipedia ToL Taxonomy	181	425	397	2078	107	476	830	7
Polygonaceae Wikipedia ToL Taxonomy		49	12	215	19	58	39	6
Pottiaceae Wikipedia ToL Taxonomy		15					68	2
Primulaceae Wikipedia ToL Taxonomy	14	30		222		223	577	5
Rosaceae Wikipedia ToL Taxonomy	22	228	21	766		273	581	6
Rubiaceae Wikipedia ToL Taxonomy	11	115	335	1427		42	49	6
Salicaceae Wikipedia ToL Taxonomy	11	11	17	124			176	5
Theaceae Wikipedia ToL Taxonomy			19	82		30	98	4
Violaceae Wikipedia ToL Taxonomy	48	49		192		51	130	5
Zamiaceae Wikipedia ToL Taxonomy	64			55		26	89	4
Zingiberaceae Wikipedia ToL Taxonomy	16			120		171	65	4